Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900177.1_cds_XP_016450217.1_44690
CDS Infomation

[gene=LOC107775058] [db_xref=GeneID:107775058] [protein=pentatricopeptide repeat-containing protein At5g67570, chloroplastic-like] [protein_id=XP_016450217.1] [location=complement(join(33021..33092,33510..33623,33776..33964,34050..34131,34257..34448,34693..35255))] [gbkey=CDS]
Sequence

ATGGAAGCCTCCACCGGACCTCCACGTTTTCCCTCACCGTCACCGTCAATAAACGTCGAC
AAGTTAAAGCAAAAGCTTCTGCAAAACGGCGTCGACCCAACTCCCAAAATCATCCACACT
CTCCGTAAAAAGCAACTTCAAAAATTCAACCGACGCCTCGCCAAAAAAGCCGCTAAAGAA
CCCGAGCCACTCACGGAAACCCAAACACAAGCCCTTACCGAAGAATCATATTTCCAGGCC
GTTAAGTCTGAGTACAAAAGCTTCAACAAAGAGGTGAATGCCAAAAATGATGTGAAAATG
GTGGGAAGGCCTTGGGAGAGAATTGAGAAACTCAAATTGCAAGAGCTTTCTAGTGAGAGT
AAGGTGTATTCTGGTGATAAATTGAATTCTGAGCATCTTTGGGAGCTCAGTGATATAATT
GAGAGTGAAAGAGATAAATTCTCATGGCTTTTGGATAATGATGTTGAAATTAAACAAGGA
TGGTTCGATAATGAAAGGGATAACTGGAACTATACACGGCGTCGTAGAGGCGAAGCTGAG
ACTATTCGGTTTATTATTGACAGATTGAGTGGGACGGAACTAGGTGTGAAGGATTATAAG
TTTTCTAAGTTGATGAAACACTCGGGATTGCAGTTTACTGAGGAGCAAATGCTGAGGTTA
GTGGAAGGGCTTGGTGAAAAGGGACAGTGGAGACACGCATTGTCTGTTGTACACTGGGTT
TTCAACTCTAAGGAACACAGACGCTGCAAGAGCAGGTTTGTGTACACTAAACTGTTGGCA
GTTCTGGGGAAAGCAAGGAGGCCCCGTGAAGCTCTTCAAGTTTTCAATTTGATGAGAGGA
GATGCCCATATTTACCCTGATATGGCAGCATACCATAGCGTGGCAGTTACACTTGGCCAA
GCTGGTCTGCTCAAAGAGTTGATCAACATCATTGACTGCATGAAGCAAAAACCTGAAAAG
ATAAAGTACATGCGGAAGAAGAACTGGGATCCTGTTCTTCAACCGGATCTTGTGGTATAT
AATGCTGTTTTAAATGCTTGTGTACCATCCCGCCAGTGGAGGGGAGTGTTCTGGGCTTTT
GAGCAGCTGAGAAAGAATGGTCTTAAGCCAAATGGGCCAAGCTATGGACTCGCGATGGAG
GTAATGTTGCAATCTGGAAGANTATATATATATATATGTATGAGGTTCGAGTCGGTAAAC
GCTCCAACATAA

Peptide Sequence

PEP ID

XP_016450217.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic-like [Nicotiana tabacum]
Sequence

MEASTGPPRFPSPSPSINVDKLKQKLLQNGVDPTPKIIHTLRKKQLQKFNRRLAKKAAKE
PEPLTETQTQALTEESYFQAVKSEYKSFNKEVNAKNDVKMVGRPWERIEKLKLQELSSES
KVYSGDKLNSEHLWELSDIIESERDKFSWLLDNDVEIKQGWFDNERDNWNYTRRRRGEAE
TIRFIIDRLSGTELGVKDYKFSKLMKHSGLQFTEEQMLRLVEGLGEKGQWRHALSVVHWV
FNSKEHRRCKSRFVYTKLLAVLGKARRPREALQVFNLMRGDAHIYPDMAAYHSVAVTLGQ
AGLLKELINIIDCMKQKPEKIKYMRKKNWDPVLQPDLVVYNAVLNACVPSRQWRGVFWAF
EQLRKNGLKPNGPSYGLAMEVMLQSGRXYIYICMRFESVNAPT

Transcript Sequence

Gene sequence data has not been registered.